MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,390
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 1,456
Total number of protein coding genes annotated/found:
1,390
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 70 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5020|JADGKU010000010.1
SEQF5020_00022
Genome Viewer
NA
AA
786/262
17716-18501
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00023
Genome Viewer
NA
AA
1002/334
18746-19747
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00024
Genome Viewer
NA
AA
750/250
20046-20795
Lactose phosphotransferase system repressor
SEQF5020|JADGKU010000010.1
SEQF5020_00025
Genome Viewer
NA
AA
918/306
20795-21712
Tagatose-6-phosphate kinase
SEQF5020|JADGKU010000010.1
SEQF5020_00026
Genome Viewer
NA
AA
1941/647
21740-23680
PTS system fructose-specific EIIABC component
SEQF5020|JADGKU010000010.1
SEQF5020_00027
Genome Viewer
NA
AA
1266/422
24992-23727
3-hydroxy-3-methylglutaryl-coenzyme A reductase
SEQF5020|JADGKU010000010.1
SEQF5020_00028
Genome Viewer
NA
AA
1161/387
26175-25015
Hydroxymethylglutaryl-CoA synthase
SEQF5020|JADGKU010000010.1
SEQF5020_00029
Genome Viewer
NA
AA
1182/394
27373-26192
Acetyl-CoA acetyltransferase
SEQF5020|JADGKU010000010.1
SEQF5020_00030
Genome Viewer
NA
AA
420/140
27567-27986
Cell division protein SepF
SEQF5020|JADGKU010000010.1
SEQF5020_00031
Genome Viewer
NA
AA
273/91
27987-28259
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00032
Genome Viewer
NA
AA
771/257
28261-29031
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00033
Genome Viewer
NA
AA
2730/910
29410-32139
Isoleucine--tRNA ligase
SEQF5020|JADGKU010000010.1
SEQF5020_00034
Genome Viewer
NA
AA
645/215
32941-32297
Uracil-DNA glycosylase
SEQF5020|JADGKU010000010.1
SEQF5020_00035
Genome Viewer
NA
AA
1809/603
33043-34851
Oligoendopeptidase F%2C plasmid
SEQF5020|JADGKU010000010.1
SEQF5020_00036
Genome Viewer
NA
AA
4065/1355
35183-39247
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00037
Genome Viewer
NA
AA
519/173
39256-39774
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00038
Genome Viewer
NA
AA
513/171
39883-40395
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00039
Genome Viewer
NA
AA
393/131
40569-40961
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00040
Genome Viewer
NA
AA
168/56
41118-41285
hypothetical protein
SEQF5020|JADGKU010000010.1
SEQF5020_00041
Genome Viewer
NA
AA
180/60
41310-41489
hypothetical protein
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 70 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
